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Cluster: HRGMv2_2046_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2046_1 HRGMv2_2046_1_138 147146 148513 - 2.A.66.1.26
peptidase HRGMv2_2046_1 HRGMv2_2046_1_139 148823 150367 + S09.UNW
CAZyme HRGMv2_2046_1 HRGMv2_2046_1_140 150393 152987 + GH3
TC HRGMv2_2046_1 HRGMv2_2046_1_141 153118 154137 + 3.A.1.24.2
TC HRGMv2_2046_1 HRGMv2_2046_1_142 154127 154786 + 3.A.1.24.5
TC HRGMv2_2046_1 HRGMv2_2046_1_143 155030 155992 + 3.A.1.24.5
CAZyme HRGMv2_2046_1 HRGMv2_2046_1_144 156059 159196 - GH106
Gene ID: HRGMv2_2046_1_138
Type: TC
Location: 147146 - 148513 (-)
Gene ID: HRGMv2_2046_1_139
Type: peptidase
Location: 148823 - 150367 (+)
Gene ID: HRGMv2_2046_1_140
Type: CAZyme
Location: 150393 - 152987 (+)
Gene ID: HRGMv2_2046_1_141
Type: TC
Location: 153118 - 154137 (+)
Gene ID: HRGMv2_2046_1_142
Type: TC
Location: 154127 - 154786 (+)
Gene ID: HRGMv2_2046_1_143
Type: TC
Location: 155030 - 155992 (+)
Gene ID: HRGMv2_2046_1_144
Type: CAZyme
Location: 156059 - 159196 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2046_1_142 vegetarian > vegan 1.12410 0.03095
HRGMv2_2046_1_143 vegan > omnivore 1.37719 0.01226

🧭 Explore Read Mapping of CGC

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