Cluster: HRGMv2_2046_CGC62
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2046
- CGC Family ID: CGCFAM_00366
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2046_80 | HRGMv2_2046_80_3 | 1877 | 2902 | + | GH33 |
| STP | HRGMv2_2046_80 | HRGMv2_2046_80_4 | 2927 | 4516 | + | SBP_bac_1 |
| TC | HRGMv2_2046_80 | HRGMv2_2046_80_5 | 4583 | 5260 | + | 3.A.1.1.10 |
Gene ID: HRGMv2_2046_80_3
Type: CAZyme
Location: 1877 - 2902 (+)
Type: CAZyme
Location: 1877 - 2902 (+)
Gene ID: HRGMv2_2046_80_4
Type: STP
Location: 2927 - 4516 (+)
Type: STP
Location: 2927 - 4516 (+)
Gene ID: HRGMv2_2046_80_5
Type: TC
Location: 4583 - 5260 (+)
Type: TC
Location: 4583 - 5260 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens faecihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.