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Cluster: HRGMv2_2046_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2046_29 HRGMv2_2046_29_6 5990 7666 - GT2 | GT2
TC HRGMv2_2046_29 HRGMv2_2046_29_7 7682 8986 - 3.A.1.103.6
TC HRGMv2_2046_29 HRGMv2_2046_29_8 9010 9804 - 3.A.1.104.1
pfam HRGMv2_2046_29 HRGMv2_2046_29_9 9834 10712 - Glycos_transf_2
CAZyme HRGMv2_2046_29 HRGMv2_2046_29_10 10731 11717 - GT2
CAZyme HRGMv2_2046_29 HRGMv2_2046_29_11 11772 12560 - GT2
pfam HRGMv2_2046_29 HRGMv2_2046_29_12 12557 12934 - DUF2304
CAZyme HRGMv2_2046_29 HRGMv2_2046_29_13 12931 13668 - GT2
pfam HRGMv2_2046_29 HRGMv2_2046_29_14 13749 15617 - DUF2142
CAZyme HRGMv2_2046_29 HRGMv2_2046_29_15 15649 17232 - GT4
Gene ID: HRGMv2_2046_29_6
Type: CAZyme
Location: 5990 - 7666 (-)
Gene ID: HRGMv2_2046_29_7
Type: TC
Location: 7682 - 8986 (-)
Gene ID: HRGMv2_2046_29_8
Type: TC
Location: 9010 - 9804 (-)
Gene ID: HRGMv2_2046_29_9
Type: pfam
Location: 9834 - 10712 (-)
Gene ID: HRGMv2_2046_29_10
Type: CAZyme
Location: 10731 - 11717 (-)
Gene ID: HRGMv2_2046_29_11
Type: CAZyme
Location: 11772 - 12560 (-)
Gene ID: HRGMv2_2046_29_12
Type: pfam
Location: 12557 - 12934 (-)
Gene ID: HRGMv2_2046_29_13
Type: CAZyme
Location: 12931 - 13668 (-)
Gene ID: HRGMv2_2046_29_14
Type: pfam
Location: 13749 - 15617 (-)
Gene ID: HRGMv2_2046_29_15
Type: CAZyme
Location: 15649 - 17232 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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