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Genome Details

Selected Rep_genome_ID: HRGMv2_2037
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Limivivens
→
Species
Limivivens sp905214955
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
C34.bin_20 3,514,782 97.47% 0.63% China(Inner Mongolia) Asia IMGG
HRGMv2_2037 3,006,988 98.73% 0.019% South Korea Asia HRGM
MGYG000004839 3,024,091 93.04% 0% China Asia UHGG
REFINED_METABAT215_SUBJECT_CONTIGS_1500_ASSEMBLY_K77_MERGED__Pilot_MoBio_Fiber_C_21_7002.73 2,894,733 95.57% 0% NA Africa Hadza
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_2037_CGC17 CGCFAM_00008 Yes 6 2
HRGMv2_2037_CGC9 CGCFAM_00009 Yes 13 5
HRGMv2_2037_CGC11 CGCFAM_00010 Yes 9 2 alpha-glucan
HRGMv2_2037_CGC19 CGCFAM_00032 Yes 9 6
HRGMv2_2037_CGC23 CGCFAM_00047 Yes 5 1
HRGMv2_2037_CGC56 CGCFAM_00054 Yes 3 1
HRGMv2_2037_CGC4 CGCFAM_00207 Yes 5 1
HRGMv2_2037_CGC7 CGCFAM_00323 Yes 6 1
HRGMv2_2037_CGC8 CGCFAM_00345 Yes 6 1
HRGMv2_2037_CGC39 CGCFAM_00351 Yes 5 3
HRGMv2_2037_CGC26 CGCFAM_00354 Yes 11 2
HRGMv2_2037_CGC30 CGCFAM_00378 Yes 6 1 pectin
HRGMv2_2037_CGC2 CGCFAM_00390 Yes 16 2
HRGMv2_2037_CGC36 CGCFAM_00624 Yes 3 1
HRGMv2_2037_CGC34 CGCFAM_00642 Yes 8 2
HRGMv2_2037_CGC16 CGCFAM_00888 Yes 5 3
HRGMv2_2037_CGC28 CGCFAM_00924 Yes 3 1
HRGMv2_2037_CGC38 CGCFAM_00954 Yes 8 1
HRGMv2_2037_CGC10 CGCFAM_01896 Yes 8 3
HRGMv2_2037_CGC32 CGCFAM_02276 Yes 19 4
HRGMv2_2037_CGC25 CGCFAM_02635 Yes 7 1
HRGMv2_2037_CGC48 CGCFAM_03476 Yes 8 4
HRGMv2_2037_CGC15 CGCFAM_03479 Yes 19 9
HRGMv2_2037_CGC12 CGCFAM_03807 Yes 8 1
HRGMv2_2037_CGC20 CGCFAM_04790 Yes 4 1
Top CAZyme Families