dbCAN Logo

Cluster: HRGMv2_2037_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2037_24 HRGMv2_2037_24_19 23453 25024 + 3.A.1.5.11
TC HRGMv2_2037_24 HRGMv2_2037_24_20 25121 26041 + 3.A.1.5.11
TC HRGMv2_2037_24 HRGMv2_2037_24_21 26055 26942 + 3.A.1.5.11
TC HRGMv2_2037_24 HRGMv2_2037_24_22 26953 27951 + 3.A.1.5.20
TC HRGMv2_2037_24 HRGMv2_2037_24_23 27948 28913 + 3.A.1.5.20
CAZyme HRGMv2_2037_24 HRGMv2_2037_24_24 28935 30242 + GH29
TF HRGMv2_2037_24 HRGMv2_2037_24_25 30245 31006 + HTH_DeoR
TC HRGMv2_2037_24 HRGMv2_2037_24_26 31041 31796 + 9.B.158.1.1
Gene ID: HRGMv2_2037_24_19
Type: TC
Location: 23453 - 25024 (+)
Gene ID: HRGMv2_2037_24_20
Type: TC
Location: 25121 - 26041 (+)
Gene ID: HRGMv2_2037_24_21
Type: TC
Location: 26055 - 26942 (+)
Gene ID: HRGMv2_2037_24_22
Type: TC
Location: 26953 - 27951 (+)
Gene ID: HRGMv2_2037_24_23
Type: TC
Location: 27948 - 28913 (+)
Gene ID: HRGMv2_2037_24_24
Type: CAZyme
Location: 28935 - 30242 (+)
Gene ID: HRGMv2_2037_24_25
Type: TF
Location: 30245 - 31006 (+)
Gene ID: HRGMv2_2037_24_26
Type: TC
Location: 31041 - 31796 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List