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Cluster: HRGMv2_2037_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2037_35 HRGMv2_2037_35_14 9492 12632 - GH137 | GH78
CAZyme HRGMv2_2037_35 HRGMv2_2037_35_15 12613 15051 - GH95
CAZyme HRGMv2_2037_35 HRGMv2_2037_35_16 15041 17665 - GH106
CAZyme HRGMv2_2037_35 HRGMv2_2037_35_17 17625 19667 - GH42
TC HRGMv2_2037_35 HRGMv2_2037_35_18 19690 20511 - 3.A.1.1.45
TC HRGMv2_2037_35 HRGMv2_2037_35_19 20508 21386 - 3.A.1.1.7
STP HRGMv2_2037_35 HRGMv2_2037_35_20 21541 22851 - SBP_bac_1
TC HRGMv2_2037_35 HRGMv2_2037_35_21 23083 24885 + 8.A.59.2.1
Gene ID: HRGMv2_2037_35_14
Type: CAZyme
Location: 9492 - 12632 (-)
Gene ID: HRGMv2_2037_35_15
Type: CAZyme
Location: 12613 - 15051 (-)
Gene ID: HRGMv2_2037_35_16
Type: CAZyme
Location: 15041 - 17665 (-)
Gene ID: HRGMv2_2037_35_17
Type: CAZyme
Location: 17625 - 19667 (-)
Gene ID: HRGMv2_2037_35_18
Type: TC
Location: 19690 - 20511 (-)
Gene ID: HRGMv2_2037_35_19
Type: TC
Location: 20508 - 21386 (-)
Gene ID: HRGMv2_2037_35_20
Type: STP
Location: 21541 - 22851 (-)
Gene ID: HRGMv2_2037_35_21
Type: TC
Location: 23083 - 24885 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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