Cluster: HRGMv2_2037_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2037
- CGC Family ID: CGCFAM_00323
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2037_2 | HRGMv2_2037_2_163 | 173423 | 175168 | + | 8.A.59.2.1 |
| TF | HRGMv2_2037_2 | HRGMv2_2037_2_164 | 175146 | 176204 | + | HTH_AraC |
| STP | HRGMv2_2037_2 | HRGMv2_2037_2_165 | 176354 | 177643 | + | SBP_bac_1 |
| TC | HRGMv2_2037_2 | HRGMv2_2037_2_166 | 177723 | 178604 | + | 3.A.1.1.41 |
| TC | HRGMv2_2037_2 | HRGMv2_2037_2_167 | 178616 | 179458 | + | 3.A.1.1.41 |
| CAZyme | HRGMv2_2037_2 | HRGMv2_2037_2_168 | 179466 | 180716 | + | GH175 |
Gene ID: HRGMv2_2037_2_163
Type: TC
Location: 173423 - 175168 (+)
Type: TC
Location: 173423 - 175168 (+)
Gene ID: HRGMv2_2037_2_164
Type: TF
Location: 175146 - 176204 (+)
Type: TF
Location: 175146 - 176204 (+)
Gene ID: HRGMv2_2037_2_165
Type: STP
Location: 176354 - 177643 (+)
Type: STP
Location: 176354 - 177643 (+)
Gene ID: HRGMv2_2037_2_166
Type: TC
Location: 177723 - 178604 (+)
Type: TC
Location: 177723 - 178604 (+)
Gene ID: HRGMv2_2037_2_167
Type: TC
Location: 178616 - 179458 (+)
Type: TC
Location: 178616 - 179458 (+)
Gene ID: HRGMv2_2037_2_168
Type: CAZyme
Location: 179466 - 180716 (+)
Type: CAZyme
Location: 179466 - 180716 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.