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Cluster: HRGMv2_2037_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2037_3 HRGMv2_2037_3_89 106223 107908 + 8.A.59.2.1
STP HRGMv2_2037_3 HRGMv2_2037_3_90 108177 109445 + SBP_bac_1
TC HRGMv2_2037_3 HRGMv2_2037_3_91 109504 110397 + 3.A.1.1.23
TC HRGMv2_2037_3 HRGMv2_2037_3_92 110394 111212 + 3.A.1.1.48
CAZyme HRGMv2_2037_3 HRGMv2_2037_3_93 111217 113649 + GH2
TC HRGMv2_2037_3 HRGMv2_2037_3_94 113681 114631 + 8.A.5.1.4
CAZyme HRGMv2_2037_3 HRGMv2_2037_3_95 114673 117159 + GH2
CAZyme HRGMv2_2037_3 HRGMv2_2037_3_96 117176 119632 + GH2
Gene ID: HRGMv2_2037_3_89
Type: TC
Location: 106223 - 107908 (+)
Gene ID: HRGMv2_2037_3_90
Type: STP
Location: 108177 - 109445 (+)
Gene ID: HRGMv2_2037_3_91
Type: TC
Location: 109504 - 110397 (+)
Gene ID: HRGMv2_2037_3_92
Type: TC
Location: 110394 - 111212 (+)
Gene ID: HRGMv2_2037_3_93
Type: CAZyme
Location: 111217 - 113649 (+)
Gene ID: HRGMv2_2037_3_94
Type: TC
Location: 113681 - 114631 (+)
Gene ID: HRGMv2_2037_3_95
Type: CAZyme
Location: 114673 - 117159 (+)
Gene ID: HRGMv2_2037_3_96
Type: CAZyme
Location: 117176 - 119632 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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