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Cluster: HRGMv2_2037_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2037_4 HRGMv2_2037_4_32 42548 43354 - 3.A.1.26.7
TC HRGMv2_2037_4 HRGMv2_2037_4_33 43351 44205 - 3.A.1.26.7
TC HRGMv2_2037_4 HRGMv2_2037_4_34 44181 45041 - 3.A.1.26.7
NULL(UNKNOWN) HRGMv2_2037_4 HRGMv2_2037_4_35 45250 46086 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2037_4 HRGMv2_2037_4_36 46228 47025 - Sigma70_r3
TC HRGMv2_2037_4 HRGMv2_2037_4_37 47015 48247 - 9.B.174.1.1
pfam HRGMv2_2037_4 HRGMv2_2037_4_38 48344 49432 - HTH_30 | GGDEF_2
CAZyme HRGMv2_2037_4 HRGMv2_2037_4_39 49513 50202 - GT26
Gene ID: HRGMv2_2037_4_32
Type: TC
Location: 42548 - 43354 (-)
Gene ID: HRGMv2_2037_4_33
Type: TC
Location: 43351 - 44205 (-)
Gene ID: HRGMv2_2037_4_34
Type: TC
Location: 44181 - 45041 (-)
Gene ID: HRGMv2_2037_4_35
Type:
Location: 45250 - 46086 (-)
Gene ID: HRGMv2_2037_4_36
Type: STP
Location: 46228 - 47025 (-)
Gene ID: HRGMv2_2037_4_37
Type: TC
Location: 47015 - 48247 (-)
Gene ID: HRGMv2_2037_4_38
Type: pfam
Location: 48344 - 49432 (-)
Gene ID: HRGMv2_2037_4_39
Type: CAZyme
Location: 49513 - 50202 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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