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Cluster: HRGMv2_2037_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2037_1 HRGMv2_2037_1_191 189261 190610 - 3.A.5.1.1
pfam HRGMv2_2037_1 HRGMv2_2037_1_192 190612 190929 - UPF0122
TF HRGMv2_2037_1 HRGMv2_2037_1_193 191087 192091 - LacI
TC HRGMv2_2037_1 HRGMv2_2037_1_194 192098 192925 - 3.A.1.1.28
TC HRGMv2_2037_1 HRGMv2_2037_1_195 192940 193830 - 3.A.1.1.20
TC HRGMv2_2037_1 HRGMv2_2037_1_196 193914 195233 - 3.A.1.1.21
TF HRGMv2_2037_1 HRGMv2_2037_1_197 195590 196615 + LacI
CAZyme HRGMv2_2037_1 HRGMv2_2037_1_198 196699 197943 - GH29
CAZyme HRGMv2_2037_1 HRGMv2_2037_1_199 197972 200056 - GH151
peptidase HRGMv2_2037_1 HRGMv2_2037_1_200 200146 201198 - M42.UPW
TC HRGMv2_2037_1 HRGMv2_2037_1_201 201286 202149 - 2.A.25.1.6
STP HRGMv2_2037_1 HRGMv2_2037_1_202 202172 203383 - ACT | PALP
TC HRGMv2_2037_1 HRGMv2_2037_1_203 203435 204373 - 3.A.5.1.1
pfam HRGMv2_2037_1 HRGMv2_2037_1_204 204383 207943 - SMC_N | SMC_hinge | AAA_15 | AAA_21 | AAA_23
pfam HRGMv2_2037_1 HRGMv2_2037_1_205 207934 208641 - dsrm | Ribonuclease_3 | Ribonucleas_3_3
TC HRGMv2_2037_1 HRGMv2_2037_1_206 208742 208972 - 3.D.1.6.4
Gene ID: HRGMv2_2037_1_191
Type: TC
Location: 189261 - 190610 (-)
Gene ID: HRGMv2_2037_1_192
Type: pfam
Location: 190612 - 190929 (-)
Gene ID: HRGMv2_2037_1_193
Type: TF
Location: 191087 - 192091 (-)
Gene ID: HRGMv2_2037_1_194
Type: TC
Location: 192098 - 192925 (-)
Gene ID: HRGMv2_2037_1_195
Type: TC
Location: 192940 - 193830 (-)
Gene ID: HRGMv2_2037_1_196
Type: TC
Location: 193914 - 195233 (-)
Gene ID: HRGMv2_2037_1_197
Type: TF
Location: 195590 - 196615 (+)
Gene ID: HRGMv2_2037_1_198
Type: CAZyme
Location: 196699 - 197943 (-)
Gene ID: HRGMv2_2037_1_199
Type: CAZyme
Location: 197972 - 200056 (-)
Gene ID: HRGMv2_2037_1_200
Type: peptidase
Location: 200146 - 201198 (-)
Gene ID: HRGMv2_2037_1_201
Type: TC
Location: 201286 - 202149 (-)
Gene ID: HRGMv2_2037_1_202
Type: STP
Location: 202172 - 203383 (-)
Gene ID: HRGMv2_2037_1_203
Type: TC
Location: 203435 - 204373 (-)
Gene ID: HRGMv2_2037_1_204
Type: pfam
Location: 204383 - 207943 (-)
Gene ID: HRGMv2_2037_1_205
Type: pfam
Location: 207934 - 208641 (-)
Gene ID: HRGMv2_2037_1_206
Type: TC
Location: 208742 - 208972 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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