Cluster: HRGMv2_2037_CGC39
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2037
- CGC Family ID: CGCFAM_00351
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2037_25 | HRGMv2_2037_25_12 | 18737 | 19648 | + | 3.A.1.1.11 |
| TC | HRGMv2_2037_25 | HRGMv2_2037_25_13 | 19666 | 20517 | + | 3.A.1.1.11 |
| CAZyme | HRGMv2_2037_25 | HRGMv2_2037_25_14 | 20645 | 22192 | + | GH35 |
| CAZyme | HRGMv2_2037_25 | HRGMv2_2037_25_15 | 22210 | 23751 | + | CBM91 | GH43_12 |
| CAZyme | HRGMv2_2037_25 | HRGMv2_2037_25_16 | 23846 | 25657 | + | CBM32 | GH43_28 |
Gene ID: HRGMv2_2037_25_12
Type: TC
Location: 18737 - 19648 (+)
Type: TC
Location: 18737 - 19648 (+)
Gene ID: HRGMv2_2037_25_13
Type: TC
Location: 19666 - 20517 (+)
Type: TC
Location: 19666 - 20517 (+)
Gene ID: HRGMv2_2037_25_14
Type: CAZyme
Location: 20645 - 22192 (+)
Type: CAZyme
Location: 20645 - 22192 (+)
Gene ID: HRGMv2_2037_25_15
Type: CAZyme
Location: 22210 - 23751 (+)
Type: CAZyme
Location: 22210 - 23751 (+)
Gene ID: HRGMv2_2037_25_16
Type: CAZyme
Location: 23846 - 25657 (+)
Type: CAZyme
Location: 23846 - 25657 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.