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Cluster: HRGMv2_2037_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2037_18 HRGMv2_2037_18_18 17974 18141 - 1.E.52.1.1
NULL(UNKNOWN) HRGMv2_2037_18 HRGMv2_2037_18_19 18249 19646 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2037_18 HRGMv2_2037_18_20 19657 20331 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2037_18 HRGMv2_2037_18_21 20403 21602 - 3.A.7.15.1
NULL(UNKNOWN) HRGMv2_2037_18 HRGMv2_2037_18_22 21562 22638 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_2037_18 HRGMv2_2037_18_23 22635 23156 - A24.UPA
CAZyme HRGMv2_2037_18 HRGMv2_2037_18_24 23611 25590 - CBM48 | GH13_9
CAZyme HRGMv2_2037_18 HRGMv2_2037_18_25 25608 26951 - GH13_20
Gene ID: HRGMv2_2037_18_18
Type: TC
Location: 17974 - 18141 (-)
Gene ID: HRGMv2_2037_18_19
Type:
Location: 18249 - 19646 (-)
Gene ID: HRGMv2_2037_18_20
Type:
Location: 19657 - 20331 (-)
Gene ID: HRGMv2_2037_18_21
Type: TC
Location: 20403 - 21602 (-)
Gene ID: HRGMv2_2037_18_22
Type:
Location: 21562 - 22638 (-)
Gene ID: HRGMv2_2037_18_23
Type: peptidase
Location: 22635 - 23156 (-)
Gene ID: HRGMv2_2037_18_24
Type: CAZyme
Location: 23611 - 25590 (-)
Gene ID: HRGMv2_2037_18_25
Type: CAZyme
Location: 25608 - 26951 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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