PROTEIN: HRGMv2_2037_18_22
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Protein File & Metadata
Source:
HRGMv2_2037_18_22.pdb
Genome ID:
Protein ID:
HRGMv2_2037_18_22
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Protein Sequence
MKKKVFAVCD LESGYAYRLM DYIYEKEAGT FEVQAFTNVK NLSAFAREQE IELLLISSSA 60 MCEAVKELPI RRIVILSEGE ILQELSNYPC VYKYQASGSL VSEVMTYYAD AEPSEPAVLL 120 KKKVEIIGIY SPVRRTLRTS FALTLGQLLG KERNVLYLNF EEYAGFASML GKEYKADLTD 180 LIYFSKEGNG QMIYRLGTIT QNLYGIDYVP PAMNPEDLKG VKFEEWLQML EYLETYSEYD 240 TIILDLDELV DGLFEILRLC SRIYMPVRED GISLAKLEQY EKVLAMRGYE DVREKTKKLK 300 LPFHSSFGQR ENYVEQLVWG ELGDYVRRLI REEEADGNQG KPEGKNAGRT AAADWTLR 358
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q60283-F1-model_v4 | 124 | 338 | 1 | 259 | 0.582 |
0.8148 |
| AF-O05853-F1-model_v4 | 121 | 341 | 1 | 257 | 0.5819 |
0.8056 |
| AF-Q9HT11-F1-model_v4 | 123 | 343 | 1 | 262 | 0.579 |
0.7955 |
| AF-Q5F5X8-F1-model_v4 | 122 | 340 | 1 | 257 | 0.5778 |
0.7927 |
| AF-A0A132P5S1-F1-model_v4 | 123 | 339 | 1 | 255 | 0.5763 |
0.7941 |
| AF-G3XCW7-F1-model_v4 | 124 | 337 | 1 | 256 | 0.5743 |
0.8119 |
| AF-Q57853-F1-model_v4 | 125 | 356 | 1 | 255 | 0.5736 |
0.7577 |
| AF-Q57967-F1-model_v4 | 119 | 336 | 1 | 239 | 0.5605 |
0.7828 |
| AF-Q57633-F1-model_v4 | 122 | 337 | 1 | 237 | 0.5582 |
0.7834 |
| AF-X8F7I0-F1-model_v4 | 120 | 341 | 29 | 287 | 0.5572 |
0.7962 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1U9NHZ6-F1-model_v4 | CBM48 | 124 | 341 | 1 | 259 | 0.4872 |
0.8204 |
| AF-A0A518BTD2-F1-model_v4 | CBM48 | 124 | 341 | 1 | 257 | 0.4668 |
0.8161 |
| AF-A0A1B4XDH4-F1-model_v4 | CBM48 | 124 | 344 | 1 | 258 | 0.4655 |
0.7852 |
| AF-A0A7T4YL43-F1-model_v4 | CBM48 | 124 | 340 | 1 | 257 | 0.4606 |
0.8202 |
| AF-A0A517YZC7-F1-model_v4 | CBM48 | 124 | 341 | 1 | 257 | 0.4605 |
0.8178 |
| A0A7M2WYZ0 | CBM48 | 124 | 337 | 1 | 258 | 0.4443 |
0.8176 |
| AF-A0A7G9NX83-F1-model_v4 | CBM48 | 23 | 339 | 24 | 300 | 0.4393 |
0.6877 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1U9NHZ6 | CBM48 | 124 | 341 | 1 | 259 | 0.4872 |
0.8204 |
| A0A1B4XDH4 | CBM48 | 124 | 344 | 1 | 258 | 0.4655 |
0.7852 |
| A0A7T4YL43 | CBM48 | 124 | 340 | 1 | 257 | 0.4606 |
0.8202 |
| A0A7M2WYZ0 | CBM48 | 124 | 337 | 1 | 258 | 0.4443 |
0.8176 |
| A0A7G9NX83 | CBM48 | 23 | 339 | 24 | 300 | 0.4393 |
0.6877 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5tvk-assembly1.cif.gz_A | 122 | 337 | 1 | 237 | 0.6001 |
0.7998 |
| 2bek-assembly2.cif.gz_D | 123 | 338 | 1 | 243 | 0.591 |
0.798 |
| 2bej-assembly1.cif.gz_A | 123 | 340 | 1 | 245 | 0.5893 |
0.7926 |
| 3fkq-assembly1.cif.gz_A-2 | 1 | 337 | 1 | 354 | 0.5492 |
0.5928 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O83296-F1-model_v4 | 123 | 340 | 1 | 253 | 0.5886 |
0.8046 |
| AF-Q72H90-F1-model_v4 | 122 | 341 | 4 | 249 | 0.5866 |
0.7878 |
| AF-Q60283-F1-model_v4 | 124 | 338 | 1 | 259 | 0.582 |
0.8148 |
| AF-P0A149-F1-model_v4 | 123 | 342 | 1 | 258 | 0.5775 |
0.7978 |
| AF-P0A150-F1-model_v4 | 123 | 341 | 1 | 257 | 0.5764 |
0.7998 |
| AF-Q9K5N0-F1-model_v4 | 123 | 337 | 1 | 253 | 0.5758 |
0.7968 |
| AF-Q57853-F1-model_v4 | 125 | 356 | 1 | 255 | 0.5736 |
0.7577 |
| AF-P47706-F1-model_v4 | 125 | 339 | 1 | 267 | 0.5728 |
0.8163 |
| AF-P37522-F1-model_v4 | 123 | 337 | 1 | 253 | 0.5723 |
0.7918 |
| AF-Q50314-F1-model_v4 | 125 | 342 | 1 | 270 | 0.572 |
0.8077 |