Cluster: HRGMv2_2037_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2037
- CGC Family ID: CGCFAM_00888
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2037_5 | HRGMv2_2037_5_65 | 79711 | 81291 | - | CBM91 | GH43_12 |
| CAZyme | HRGMv2_2037_5 | HRGMv2_2037_5_66 | 81657 | 83642 | + | CE20 | CE20 |
| CAZyme | HRGMv2_2037_5 | HRGMv2_2037_5_67 | 83699 | 87175 | + | GH2 |
| TC | HRGMv2_2037_5 | HRGMv2_2037_5_68 | 88281 | 89231 | + | 3.A.1.1.10 |
| TC | HRGMv2_2037_5 | HRGMv2_2037_5_69 | 89250 | 90122 | + | 3.A.1.1.29 |
Gene ID: HRGMv2_2037_5_65
Type: CAZyme
Location: 79711 - 81291 (-)
Type: CAZyme
Location: 79711 - 81291 (-)
Gene ID: HRGMv2_2037_5_66
Type: CAZyme
Location: 81657 - 83642 (+)
Type: CAZyme
Location: 81657 - 83642 (+)
Gene ID: HRGMv2_2037_5_67
Type: CAZyme
Location: 83699 - 87175 (+)
Type: CAZyme
Location: 83699 - 87175 (+)
Gene ID: HRGMv2_2037_5_68
Type: TC
Location: 88281 - 89231 (+)
Type: TC
Location: 88281 - 89231 (+)
Gene ID: HRGMv2_2037_5_69
Type: TC
Location: 89250 - 90122 (+)
Type: TC
Location: 89250 - 90122 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.