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Cluster: HRGMv2_2037_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2037_6 HRGMv2_2037_6_44 50835 52643 - GT2
TC HRGMv2_2037_6 HRGMv2_2037_6_45 52657 53403 - 3.A.1.103.1
TC HRGMv2_2037_6 HRGMv2_2037_6_46 53415 54209 - 3.A.1.103.1
CAZyme HRGMv2_2037_6 HRGMv2_2037_6_47 54209 55213 - GT2
CAZyme HRGMv2_2037_6 HRGMv2_2037_6_48 55232 56338 - GT2
CAZyme HRGMv2_2037_6 HRGMv2_2037_6_49 56331 57503 - GT2
CAZyme HRGMv2_2037_6 HRGMv2_2037_6_50 57741 58892 - GT2
CAZyme HRGMv2_2037_6 HRGMv2_2037_6_51 58910 59677 - GT2
TC HRGMv2_2037_6 HRGMv2_2037_6_52 59700 61115 - 9.B.18.1.3
Gene ID: HRGMv2_2037_6_44
Type: CAZyme
Location: 50835 - 52643 (-)
Gene ID: HRGMv2_2037_6_45
Type: TC
Location: 52657 - 53403 (-)
Gene ID: HRGMv2_2037_6_46
Type: TC
Location: 53415 - 54209 (-)
Gene ID: HRGMv2_2037_6_47
Type: CAZyme
Location: 54209 - 55213 (-)
Gene ID: HRGMv2_2037_6_48
Type: CAZyme
Location: 55232 - 56338 (-)
Gene ID: HRGMv2_2037_6_49
Type: CAZyme
Location: 56331 - 57503 (-)
Gene ID: HRGMv2_2037_6_50
Type: CAZyme
Location: 57741 - 58892 (-)
Gene ID: HRGMv2_2037_6_51
Type: CAZyme
Location: 58910 - 59677 (-)
Gene ID: HRGMv2_2037_6_52
Type: TC
Location: 59700 - 61115 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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