Cluster: HRGMv2_2037_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2037
- CGC Family ID: CGCFAM_00345
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2037_2 | HRGMv2_2037_2_173 | 184403 | 185938 | - | CBM91 | GH43_10 |
| NULL(UNKNOWN) | HRGMv2_2037_2 | HRGMv2_2037_2_174 | 186144 | 188159 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2037_2 | HRGMv2_2037_2_175 | 188226 | 189071 | - | 3.A.1.1.11 |
| TC | HRGMv2_2037_2 | HRGMv2_2037_2_176 | 189087 | 189995 | - | 3.A.1.1.11 |
| STP | HRGMv2_2037_2 | HRGMv2_2037_2_177 | 190111 | 191439 | - | SBP_bac_1 |
| TC | HRGMv2_2037_2 | HRGMv2_2037_2_178 | 191596 | 193350 | - | 8.A.59.2.1 |
Gene ID: HRGMv2_2037_2_173
Type: CAZyme
Location: 184403 - 185938 (-)
Type: CAZyme
Location: 184403 - 185938 (-)
Gene ID: HRGMv2_2037_2_174
Type:
Location: 186144 - 188159 (-)
Type:
Location: 186144 - 188159 (-)
Gene ID: HRGMv2_2037_2_175
Type: TC
Location: 188226 - 189071 (-)
Type: TC
Location: 188226 - 189071 (-)
Gene ID: HRGMv2_2037_2_176
Type: TC
Location: 189087 - 189995 (-)
Type: TC
Location: 189087 - 189995 (-)
Gene ID: HRGMv2_2037_2_177
Type: STP
Location: 190111 - 191439 (-)
Type: STP
Location: 190111 - 191439 (-)
Gene ID: HRGMv2_2037_2_178
Type: TC
Location: 191596 - 193350 (-)
Type: TC
Location: 191596 - 193350 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.