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Cluster: HRGMv2_2037_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2037_15 HRGMv2_2037_15_16 19749 20663 + 3.A.1.1.10
TC HRGMv2_2037_15 HRGMv2_2037_15_17 20679 21554 + 3.A.1.1.29
STP HRGMv2_2037_15 HRGMv2_2037_15_18 21575 23179 + SBP_bac_1
TC HRGMv2_2037_15 HRGMv2_2037_15_19 23255 25072 + 8.A.59.2.1
NULL(UNKNOWN) HRGMv2_2037_15 HRGMv2_2037_15_20 25062 26792 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2037_15 HRGMv2_2037_15_21 26868 28340 + GH29
TF HRGMv2_2037_15 HRGMv2_2037_15_22 28484 30754 + HTH_AraC | HTH_AraC
TC HRGMv2_2037_15 HRGMv2_2037_15_23 30925 31845 + 3.A.1.1.29
TC HRGMv2_2037_15 HRGMv2_2037_15_24 31871 32761 + 3.A.1.1.10
NULL(UNKNOWN) HRGMv2_2037_15 HRGMv2_2037_15_25 32823 34565 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2037_15 HRGMv2_2037_15_26 34679 36985 + GH95
CAZyme HRGMv2_2037_15 HRGMv2_2037_15_27 37246 39666 + GH2
CAZyme HRGMv2_2037_15 HRGMv2_2037_15_28 39698 41128 + GH43_35
NULL(UNKNOWN) HRGMv2_2037_15 HRGMv2_2037_15_29 41133 41828 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2037_15 HRGMv2_2037_15_30 42094 42492 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2037_15 HRGMv2_2037_15_31 42541 43572 + 9.B.34.1.2
NULL(UNKNOWN) HRGMv2_2037_15 HRGMv2_2037_15_32 43716 43829 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2037_15 HRGMv2_2037_15_33 43915 45312 - 2.A.25.1.9
TC HRGMv2_2037_15 HRGMv2_2037_15_34 45502 46857 - 2.A.66.1.33
Gene ID: HRGMv2_2037_15_16
Type: TC
Location: 19749 - 20663 (+)
Gene ID: HRGMv2_2037_15_17
Type: TC
Location: 20679 - 21554 (+)
Gene ID: HRGMv2_2037_15_18
Type: STP
Location: 21575 - 23179 (+)
Gene ID: HRGMv2_2037_15_19
Type: TC
Location: 23255 - 25072 (+)
Gene ID: HRGMv2_2037_15_20
Type:
Location: 25062 - 26792 (+)
Gene ID: HRGMv2_2037_15_21
Type: CAZyme
Location: 26868 - 28340 (+)
Gene ID: HRGMv2_2037_15_22
Type: TF
Location: 28484 - 30754 (+)
Gene ID: HRGMv2_2037_15_23
Type: TC
Location: 30925 - 31845 (+)
Gene ID: HRGMv2_2037_15_24
Type: TC
Location: 31871 - 32761 (+)
Gene ID: HRGMv2_2037_15_25
Type:
Location: 32823 - 34565 (+)
Gene ID: HRGMv2_2037_15_26
Type: CAZyme
Location: 34679 - 36985 (+)
Gene ID: HRGMv2_2037_15_27
Type: CAZyme
Location: 37246 - 39666 (+)
Gene ID: HRGMv2_2037_15_28
Type: CAZyme
Location: 39698 - 41128 (+)
Gene ID: HRGMv2_2037_15_29
Type:
Location: 41133 - 41828 (+)
Gene ID: HRGMv2_2037_15_30
Type:
Location: 42094 - 42492 (+)
Gene ID: HRGMv2_2037_15_31
Type: TC
Location: 42541 - 43572 (+)
Gene ID: HRGMv2_2037_15_32
Type:
Location: 43716 - 43829 (+)
Gene ID: HRGMv2_2037_15_33
Type: TC
Location: 43915 - 45312 (-)
Gene ID: HRGMv2_2037_15_34
Type: TC
Location: 45502 - 46857 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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