PROTEIN: HRGMv2_2037_15_25
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Protein File & Metadata
Source:
HRGMv2_2037_15_25.pdb
Genome ID:
Protein ID:
HRGMv2_2037_15_25
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Protein Sequence
MKSKSIKKFL ALMTTAAMTF GGFGNFGGAA TVFAEEDPFS FESVSDVTFP LKEKLELTVF 60 VYATNTGGGT FQTNYVTDYI EEKTNIHLNF VYDLDGDDAK TKLNLIMTDP SSMPDIFLAT 120 NWTKSELQSY GQQGLVIPLD DYLKDAPMWN EMNEECPTRL GDITMSDGHI YNYGQTNECY 180 HCQFQNRMYI YMPWVESLNE GHVPETTEEL YEFLKKVKEN DPNGNGIADE VPMTGYIGGW 240 STDPTNWLVN AFVENNNPLS NTNPTVAAGM VVNDGKIEYS PMSDGYKKAM EYIHKLYAEG 300 LLDNQTFTQD NTQFTSLLDN EGANLVAVHA GGAPQVDGTH FWSNTEGPWQ DWAVLSPVEG 360 PDGVRLSVMN LNNYFASCQG VVSANCKYPE IAVALFDFLC NTEPTIVQSN GPEGLGWNYT 420 TEGVSLGGGT PLYEKYSIPE DYDWVGNGYK ADYGKNYYWA SDATIGCGTA EYRASLRVEN 480 PDLNTEAFLQ KAAEQYAEFA PDESTIVPNL VFEGQDAQTV SEGTLTIGGY VNQACVQFIT 540 GDLDVEKDWD TYINKLETMG VENYIATYQS AYDTYMSNLQ 580
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 38 | 577 | 30 | 502 | 0.719 |
0.8302 |
| AF-A0A133CDW9-F1-model_v4 | 54 | 570 | 42 | 444 | 0.5744 |
0.7232 |
| AF-K0F002-F1-model_v4 | 44 | 567 | 44 | 439 | 0.5587 |
0.7104 |
| AF-K0EMP7-F1-model_v4 | 26 | 571 | 10 | 444 | 0.5568 |
0.6593 |
| AF-K0F1Y0-F1-model_v4 | 20 | 567 | 33 | 433 | 0.5495 |
0.6868 |
| AF-Q8DRJ6-F1-model_v4 | 11 | 580 | 37 | 514 | 0.5225 |
0.6099 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 20 | 580 | 26 | 506 | 0.647 |
0.7424 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 20 | 580 | 26 | 506 | 0.647 |
0.7424 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5g5y-assembly1.cif.gz_A | 53 | 580 | 1 | 494 | 0.7843 |
0.8596 |
| 6fth-assembly1.cif.gz_A | 53 | 580 | 1 | 496 | 0.7629 |
0.8372 |
| 3omb-assembly1.cif.gz_A | 53 | 577 | 5 | 503 | 0.7627 |
0.8377 |
| 5xs8-assembly1.cif.gz_A | 56 | 573 | 1 | 474 | 0.6723 |
0.7569 |
| 4tqu-assembly1.cif.gz_Q | 48 | 580 | 3 | 491 | 0.6658 |
0.7436 |
| 5h6u-assembly1.cif.gz_A | 49 | 580 | 1 | 487 | 0.6653 |
0.7421 |
| 5g62-assembly2.cif.gz_B | 56 | 580 | 1 | 491 | 0.6652 |
0.739 |
| 6jhx-assembly2.cif.gz_B | 48 | 580 | 3 | 483 | 0.6615 |
0.743 |
| 3vlw-assembly2.cif.gz_B | 48 | 580 | 1 | 489 | 0.6612 |
0.7368 |
| 5suo-assembly1.cif.gz_A | 55 | 580 | 1 | 451 | 0.6412 |
0.7384 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 37 | 580 | 34 | 538 | 0.7529 |
0.8437 |
| AF-Q795R2-F1-model_v4 | 11 | 577 | 8 | 498 | 0.7509 |
0.8336 |
| AF-P37966-F1-model_v4 | 20 | 577 | 13 | 502 | 0.7171 |
0.8049 |
| AF-Q9K491-F1-model_v4 | 22 | 567 | 13 | 423 | 0.5759 |
0.7 |
| AF-Q9RUE8-F1-model_v4 | 53 | 567 | 17 | 420 | 0.5544 |
0.6783 |
| AF-A0A0H2UMY0-F1-model_v4 | 1 | 580 | 16 | 491 | 0.53 |
0.6089 |
| AF-P58300-F1-model_v4 | 48 | 567 | 52 | 434 | 0.5144 |
0.6686 |