Cluster: HRGMv2_2037_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2037
- CGC Family ID: CGCFAM_00207
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2037_2 | HRGMv2_2037_2_39 | 38640 | 39518 | - | 3.A.1.24.5 |
| TC | HRGMv2_2037_2 | HRGMv2_2037_2_40 | 39582 | 40241 | - | 3.A.1.24.5 |
| TC | HRGMv2_2037_2 | HRGMv2_2037_2_41 | 40231 | 41265 | - | 3.A.1.24.2 |
| NULL(UNKNOWN) | HRGMv2_2037_2 | HRGMv2_2037_2_42 | 41431 | 41916 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2037_2 | HRGMv2_2037_2_43 | 41895 | 43949 | - | GH31_4 |
Gene ID: HRGMv2_2037_2_39
Type: TC
Location: 38640 - 39518 (-)
Type: TC
Location: 38640 - 39518 (-)
Gene ID: HRGMv2_2037_2_40
Type: TC
Location: 39582 - 40241 (-)
Type: TC
Location: 39582 - 40241 (-)
Gene ID: HRGMv2_2037_2_41
Type: TC
Location: 40231 - 41265 (-)
Type: TC
Location: 40231 - 41265 (-)
Gene ID: HRGMv2_2037_2_42
Type:
Location: 41431 - 41916 (+)
Type:
Location: 41431 - 41916 (+)
Gene ID: HRGMv2_2037_2_43
Type: CAZyme
Location: 41895 - 43949 (-)
Type: CAZyme
Location: 41895 - 43949 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.