Cluster: HRGMv2_2037_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2037
- CGC Family ID: CGCFAM_00008
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2037_6 | HRGMv2_2037_6_20 | 18538 | 19497 | - | GT2 |
| pfam | HRGMv2_2037_6 | HRGMv2_2037_6_21 | 19494 | 20840 | - | Aminotran_5 | DegT_DnrJ_EryC1 |
| pfam | HRGMv2_2037_6 | HRGMv2_2037_6_22 | 20871 | 21650 | - | NTP_transferase | NTP_transf_3 |
| CAZyme | HRGMv2_2037_6 | HRGMv2_2037_6_23 | 22087 | 25500 | - | GT2 |
| TC | HRGMv2_2037_6 | HRGMv2_2037_6_24 | 25531 | 26907 | - | 3.A.1.103.6 |
| TC | HRGMv2_2037_6 | HRGMv2_2037_6_25 | 26925 | 27782 | - | 3.A.1.103.1 |
Gene ID: HRGMv2_2037_6_20
Type: CAZyme
Location: 18538 - 19497 (-)
Type: CAZyme
Location: 18538 - 19497 (-)
Gene ID: HRGMv2_2037_6_21
Type: pfam
Location: 19494 - 20840 (-)
Type: pfam
Location: 19494 - 20840 (-)
Gene ID: HRGMv2_2037_6_22
Type: pfam
Location: 20871 - 21650 (-)
Type: pfam
Location: 20871 - 21650 (-)
Gene ID: HRGMv2_2037_6_23
Type: CAZyme
Location: 22087 - 25500 (-)
Type: CAZyme
Location: 22087 - 25500 (-)
Gene ID: HRGMv2_2037_6_24
Type: TC
Location: 25531 - 26907 (-)
Type: TC
Location: 25531 - 26907 (-)
Gene ID: HRGMv2_2037_6_25
Type: TC
Location: 26925 - 27782 (-)
Type: TC
Location: 26925 - 27782 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp905214955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.