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Cluster: HRGMv2_2037_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2037_4 HRGMv2_2037_4_3 14643 15962 + 3.A.1.1.45
TC HRGMv2_2037_4 HRGMv2_2037_4_4 16045 16887 + 3.A.1.1.45
TC HRGMv2_2037_4 HRGMv2_2037_4_5 16887 17723 + 3.A.1.1.45
CAZyme HRGMv2_2037_4 HRGMv2_2037_4_6 17767 19248 + GH77
TF HRGMv2_2037_4 HRGMv2_2037_4_7 19303 20337 + LacI
CAZyme HRGMv2_2037_4 HRGMv2_2037_4_8 20492 23527 - GH2
TC HRGMv2_2037_4 HRGMv2_2037_4_9 23599 24405 - 3.A.1.1.4
TC HRGMv2_2037_4 HRGMv2_2037_4_10 24402 25289 - 3.A.1.1.4
TC HRGMv2_2037_4 HRGMv2_2037_4_11 25401 26687 - 3.A.1.1.4
Gene ID: HRGMv2_2037_4_3
Type: TC
Location: 14643 - 15962 (+)
Gene ID: HRGMv2_2037_4_4
Type: TC
Location: 16045 - 16887 (+)
Gene ID: HRGMv2_2037_4_5
Type: TC
Location: 16887 - 17723 (+)
Gene ID: HRGMv2_2037_4_6
Type: CAZyme
Location: 17767 - 19248 (+)
Gene ID: HRGMv2_2037_4_7
Type: TF
Location: 19303 - 20337 (+)
Gene ID: HRGMv2_2037_4_8
Type: CAZyme
Location: 20492 - 23527 (-)
Gene ID: HRGMv2_2037_4_9
Type: TC
Location: 23599 - 24405 (-)
Gene ID: HRGMv2_2037_4_10
Type: TC
Location: 24402 - 25289 (-)
Gene ID: HRGMv2_2037_4_11
Type: TC
Location: 25401 - 26687 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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