Genome Details
Selected Rep_genome_ID: HRGMv2_0132
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp902491835
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0132 | 2,467,660 | 98.13% | 0.721% | Malaysia | Asia | HRGM |
| MGYG000004056 | 2,329,828 | 95.54% | 1.06% | United Kingdom | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0132_CGC2 | CGCFAM_00013 | Yes | 7 | 1 | |
| HRGMv2_0132_CGC18 | CGCFAM_00857 | Yes | 4 | 1 | |
| HRGMv2_0132_CGC6 | CGCFAM_00915 | Yes | 11 | 1 | |
| HRGMv2_0132_CGC12 | CGCFAM_01217 | Yes | 6 | 2 | |
| HRGMv2_0132_CGC23 | CGCFAM_01376 | Yes | 5 | 1 | |
| HRGMv2_0132_CGC20 | CGCFAM_02163 | Yes | 6 | 1 | |
| HRGMv2_0132_CGC8 | CGCFAM_02861 | Yes | 4 | 2 | |
| HRGMv2_0132_CGC13 | CGCFAM_03645 | Yes | 5 | 2 | |
| HRGMv2_0132_CGC30 | CGCFAM_05568 | Yes | 4 | 3 | |
| HRGMv2_0132_CGC15 | CGCFAM_05605 | Yes | 7 | 1 | |
| HRGMv2_0132_CGC1 | CGCFAM_05606 | Yes | 4 | 1 | |
| HRGMv2_0132_CGC31 | CGCFAM_05760 | Yes | 3 | 1 | |
| HRGMv2_0132_CGC27 | CGCFAM_05939 | Yes | 3 | 1 | |
| HRGMv2_0132_CGC28 | CGCFAM_05939 | Yes | 3 | 1 | |
| HRGMv2_0132_CGC3 | CGCFAM_08643 | Yes | 6 | 2 | |
| HRGMv2_0132_CGC26 | CGCFAM_09125 | Yes | 3 | 2 | |
| HRGMv2_0132_CGC11 | CGCFAM_09369 | Yes | 4 | 1 | |
| HRGMv2_0132_CGC25 | CGCFAM_09500 | Yes | 6 | 1 | |
| HRGMv2_0132_CGC4 | CGCFAM_09501 | Yes | 5 | 1 | |
| HRGMv2_0132_CGC5 | CGCFAM_09502 | Yes | 7 | 1 | |
| HRGMv2_0132_CGC7 | CGCFAM_09503 | Yes | 6 | 1 |
Top CAZyme Families