Cluster: HRGMv2_0132_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0132
- CGC Family ID: CGCFAM_02861
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0132_13 | HRGMv2_0132_13_24 | 29461 | 30879 | + | 2.A.1.1.3 |
| CAZyme | HRGMv2_0132_13 | HRGMv2_0132_13_25 | 30937 | 32346 | + | GH175 |
| CAZyme | HRGMv2_0132_13 | HRGMv2_0132_13_26 | 32378 | 34840 | + | GH95 |
| TC | HRGMv2_0132_13 | HRGMv2_0132_13_27 | 35815 | 39117 | - | 3.A.5.1.1 |
Gene ID: HRGMv2_0132_13_24
Type: TC
Location: 29461 - 30879 (+)
Type: TC
Location: 29461 - 30879 (+)
Gene ID: HRGMv2_0132_13_25
Type: CAZyme
Location: 30937 - 32346 (+)
Type: CAZyme
Location: 30937 - 32346 (+)
Gene ID: HRGMv2_0132_13_26
Type: CAZyme
Location: 32378 - 34840 (+)
Type: CAZyme
Location: 32378 - 34840 (+)
Gene ID: HRGMv2_0132_13_27
Type: TC
Location: 35815 - 39117 (-)
Type: TC
Location: 35815 - 39117 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp902491835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.