Cluster: HRGMv2_0132_CGC31
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0132
- CGC Family ID: CGCFAM_05760
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0132_84 | HRGMv2_0132_84_2 | 1463 | 2422 | + | CE1 |
| pfam | HRGMv2_0132_84 | HRGMv2_0132_84_3 | 2437 | 2703 | - | Acetyltransf_1 | Acetyltransf_CG |
| TC | HRGMv2_0132_84 | HRGMv2_0132_84_4 | 2848 | 3408 | - | 1.B.44.2.1 |
Gene ID: HRGMv2_0132_84_2
Type: CAZyme
Location: 1463 - 2422 (+)
Type: CAZyme
Location: 1463 - 2422 (+)
Gene ID: HRGMv2_0132_84_3
Type: pfam
Location: 2437 - 2703 (-)
Type: pfam
Location: 2437 - 2703 (-)
Gene ID: HRGMv2_0132_84_4
Type: TC
Location: 2848 - 3408 (-)
Type: TC
Location: 2848 - 3408 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp902491835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0132_84_3 | vegan > omnivore | 1.05525 | 0.03281 |