Cluster: HRGMv2_0132_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0132
- CGC Family ID: CGCFAM_00857
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0132_27 | HRGMv2_0132_27_14 | 11661 | 12947 | - | 9.A.40.2.4 |
| pfam | HRGMv2_0132_27 | HRGMv2_0132_27_15 | 13145 | 14116 | + | AP_endonuc_2 |
| CAZyme | HRGMv2_0132_27 | HRGMv2_0132_27_16 | 14203 | 16980 | + | CBM67 | GH78 |
| TC | HRGMv2_0132_27 | HRGMv2_0132_27_17 | 18156 | 19838 | - | 2.A.53.3.9 |
Gene ID: HRGMv2_0132_27_14
Type: TC
Location: 11661 - 12947 (-)
Type: TC
Location: 11661 - 12947 (-)
Gene ID: HRGMv2_0132_27_15
Type: pfam
Location: 13145 - 14116 (+)
Type: pfam
Location: 13145 - 14116 (+)
Gene ID: HRGMv2_0132_27_16
Type: CAZyme
Location: 14203 - 16980 (+)
Type: CAZyme
Location: 14203 - 16980 (+)
Gene ID: HRGMv2_0132_27_17
Type: TC
Location: 18156 - 19838 (-)
Type: TC
Location: 18156 - 19838 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp902491835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.