Cluster: HRGMv2_0132_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0132
- CGC Family ID: CGCFAM_09125
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0132_53 | HRGMv2_0132_53_4 | 2169 | 3695 | - | 2.A.17.1.6 |
| CAZyme | HRGMv2_0132_53 | HRGMv2_0132_53_5 | 3819 | 5855 | + | GH13_8 |
| CAZyme | HRGMv2_0132_53 | HRGMv2_0132_53_6 | 6231 | 8828 | + | CBM57 | GH2 |
Gene ID: HRGMv2_0132_53_4
Type: TC
Location: 2169 - 3695 (-)
Type: TC
Location: 2169 - 3695 (-)
Gene ID: HRGMv2_0132_53_5
Type: CAZyme
Location: 3819 - 5855 (+)
Type: CAZyme
Location: 3819 - 5855 (+)
Gene ID: HRGMv2_0132_53_6
Type: CAZyme
Location: 6231 - 8828 (+)
Type: CAZyme
Location: 6231 - 8828 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp902491835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0132_53_6 | vegetarian > omnivore | 1.08422 | 0.00430 |