Cluster: HRGMv2_0132_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0132
- CGC Family ID: CGCFAM_05606
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0132_1 | HRGMv2_0132_1_36 | 48657 | 50051 | - | CE11 |
| NULL(UNKNOWN) | HRGMv2_0132_1 | HRGMv2_0132_1_37 | 50135 | 50977 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0132_1 | HRGMv2_0132_1_38 | 51037 | 51888 | + | adh_short | adh_short_C2 |
| TC | HRGMv2_0132_1 | HRGMv2_0132_1_39 | 52286 | 53590 | - | 9.A.40.1.1 |
Gene ID: HRGMv2_0132_1_36
Type: CAZyme
Location: 48657 - 50051 (-)
Type: CAZyme
Location: 48657 - 50051 (-)
Gene ID: HRGMv2_0132_1_37
Type:
Location: 50135 - 50977 (+)
Type:
Location: 50135 - 50977 (+)
Gene ID: HRGMv2_0132_1_38
Type: pfam
Location: 51037 - 51888 (+)
Type: pfam
Location: 51037 - 51888 (+)
Gene ID: HRGMv2_0132_1_39
Type: TC
Location: 52286 - 53590 (-)
Type: TC
Location: 52286 - 53590 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes_A
Species
Alistipes_A sp902491835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0132_1_37 | vegetarian > omnivore | 1.26524 | 0.00430 |