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Cluster: HRGMv2_0132_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0132_17 HRGMv2_0132_17_25 31441 31986 + 2.A.51.1.6
pfam HRGMv2_0132_17 HRGMv2_0132_17_26 31983 32507 + Chromate_transp
NULL(UNKNOWN) HRGMv2_0132_17 HRGMv2_0132_17_27 32578 32796 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0132_17 HRGMv2_0132_17_28 33075 34751 - 9.B.174.1.2
TC HRGMv2_0132_17 HRGMv2_0132_17_29 34806 35795 - 9.B.168.1.1
pfam HRGMv2_0132_17 HRGMv2_0132_17_30 35958 36806 + AP_endonuc_2
CAZyme HRGMv2_0132_17 HRGMv2_0132_17_31 37199 38884 + GT83
Gene ID: HRGMv2_0132_17_25
Type: TC
Location: 31441 - 31986 (+)
Gene ID: HRGMv2_0132_17_26
Type: pfam
Location: 31983 - 32507 (+)
Gene ID: HRGMv2_0132_17_27
Type:
Location: 32578 - 32796 (-)
Gene ID: HRGMv2_0132_17_28
Type: TC
Location: 33075 - 34751 (-)
Gene ID: HRGMv2_0132_17_29
Type: TC
Location: 34806 - 35795 (-)
Gene ID: HRGMv2_0132_17_30
Type: pfam
Location: 35958 - 36806 (+)
Gene ID: HRGMv2_0132_17_31
Type: CAZyme
Location: 37199 - 38884 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0132_17_25 vegetarian > omnivore 1.17518 0.00430
HRGMv2_0132_17_26 vegetarian > omnivore 1.08923 0.00430

🧭 Explore Read Mapping of CGC

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