dbCAN HGM

Cluster: HRGMv2_0132_CGC3

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_0132_5	HRGMv2_0132_5_49	60862	61905	+	CBM50
pfam	HRGMv2_0132_5	HRGMv2_0132_5_50	62277	62768	-	GtrA_DPMS_TM
pfam	HRGMv2_0132_5	HRGMv2_0132_5_51	62765	64786	-	Helicase_C \| ResIII \| UvrB \| UvrB_inter
TC	HRGMv2_0132_5	HRGMv2_0132_5_52	64854	65471	+	2.A.107.1.1
pfam	HRGMv2_0132_5	HRGMv2_0132_5_53	65688	67640	+	Toprim \| Zn_ribbon_DnaG \| DNAG_N \| DnaB_bind \| Toprim_2 \| Toprim_4
CAZyme	HRGMv2_0132_5	HRGMv2_0132_5_54	68060	69916	-	GH2

Gene ID: HRGMv2_0132_5_49
Type: CAZyme
Location: 60862 - 61905 (+)

Gene ID: HRGMv2_0132_5_50
Type: pfam
Location: 62277 - 62768 (-)

Gene ID: HRGMv2_0132_5_51
Type: pfam
Location: 62765 - 64786 (-)

Gene ID: HRGMv2_0132_5_52
Type: TC
Location: 64854 - 65471 (+)

Gene ID: HRGMv2_0132_5_53
Type: pfam
Location: 65688 - 67640 (+)

Gene ID: HRGMv2_0132_5_54
Type: CAZyme
Location: 68060 - 69916 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0132_5_49	vegetarian > omnivore	1.21750	0.00430
HRGMv2_0132_5_50	vegetarian > omnivore	1.15176	0.00430
HRGMv2_0132_5_50	vegetarian > vegan	1.24749	0.00406
HRGMv2_0132_5_52	vegetarian > omnivore	1.21320	0.00430
HRGMv2_0132_5_54	vegetarian > omnivore	1.50417	0.00430