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Genome Details

Selected Rep_genome_ID: B65.bin_10
Total Genomes Found: 15
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Roseburia
→
Species
Roseburia intestinalis
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
AG463_75 3,516,217 98.39% 0.38% NA Africa H3AfricaPhase2
B65.bin_10 4,462,599 99.03% 0.36% China(Inner Mongolia) Asia IMGG
CGMR013611 3,481,206 98.55% 0.6% China Asia CGMR
GCA_021623275.1_ASM2162327v1_genomic 3,224,778 94.95% 0.76% NA Africa H3AfricaPhase1
HRGMv2_2172 3,779,671 99.03% 0.362% Malaysia Asia HRGM
Rep_2180 4,242,445 98.2931% 0.845411% NA NA WIS
SPMP08_bin.22 3,404,389 92.89% 2.54% Singapore Asia SPMP
SPMP103_bin.19 3,926,547 96.36% 1.09% Singapore Asia SPMP
SPMP107_bin.18 3,861,305 96.07% 0.36% Singapore Asia SPMP
SPMP36_bin.93 4,096,316 97.17% 3.79% Singapore Asia SPMP
SPMP39_bin.61 3,806,446 98.05% 1.09% Singapore Asia SPMP
SPMP46_bin.75 3,758,338 98.15% 1.09% Singapore Asia SPMP
SPMP60_bin.94 3,683,037 96.94% 1.33% Singapore Asia SPMP
SPMP92_bin.55 3,631,368 96.49% 0.7% Singapore Asia SPMP
SPMP95_bin.14 3,862,508 94.99% 2.05% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
B65.bin_10_CGC30 CGCFAM_00032 Yes 3 2
B65.bin_10_CGC32 CGCFAM_00047 Yes 9 1
B65.bin_10_CGC25 CGCFAM_00106 Yes 6 2 alpha-glucan
B65.bin_10_CGC27 CGCFAM_00161 Yes 10 1
B65.bin_10_CGC49 CGCFAM_00208 Yes 15 5
B65.bin_10_CGC35 CGCFAM_00226 Yes 13 7 beta-mannan
B65.bin_10_CGC40 CGCFAM_00419 Yes 6 2
B65.bin_10_CGC44 CGCFAM_00458 Yes 10 5
B65.bin_10_CGC54 CGCFAM_00747 Yes 5 1
B65.bin_10_CGC28 CGCFAM_00846 Yes 6 1
B65.bin_10_CGC16 CGCFAM_02945 Yes 8 3 alpha-glucan
B65.bin_10_CGC1 CGCFAM_03049 Yes 3 1
B65.bin_10_CGC50 CGCFAM_03124 Yes 8 1
B65.bin_10_CGC24 CGCFAM_03173 Yes 20 8
B65.bin_10_CGC8 CGCFAM_03215 Yes 12 4
B65.bin_10_CGC23 CGCFAM_04592 Yes 14 4
B65.bin_10_CGC43 CGCFAM_04594 Yes 4 1
B65.bin_10_CGC6 CGCFAM_04596 Yes 5 3
B65.bin_10_CGC18 CGCFAM_04619 Yes 15 7
B65.bin_10_CGC52 CGCFAM_04792 Yes 5 2
B65.bin_10_CGC9 CGCFAM_04851 Yes 3 1
B65.bin_10_CGC10 CGCFAM_04853 Yes 9 1
B65.bin_10_CGC19 CGCFAM_06843 Yes 3 1
B65.bin_10_CGC17 CGCFAM_07363 Yes 7 1
B65.bin_10_CGC12 CGCFAM_07536 Yes 10 3
Top CAZyme Families