Cluster: B65.bin_10_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: B65.bin_10
- CGC Family ID: CGCFAM_00106
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B65_contig_71 | B65_contig_71_1803 | 1947348 | 1948961 | + | GH77 |
| pfam | B65_contig_71 | B65_contig_71_1804 | 1949046 | 1950383 | + | SBP_bac_8 |
| TC | B65_contig_71 | B65_contig_71_1805 | 1950469 | 1951851 | + | 3.A.1.1.27 |
| TC | B65_contig_71 | B65_contig_71_1806 | 1951851 | 1952762 | + | 3.A.1.1.27 |
| NULL(UNKNOWN) | B65_contig_71 | B65_contig_71_1807 | 1952777 | 1952875 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B65_contig_71 | B65_contig_71_1808 | 1953085 | 1954848 | + | GH13_36 |
Gene ID: B65_contig_71_1803
Type: CAZyme
Location: 1947348 - 1948961 (+)
Type: CAZyme
Location: 1947348 - 1948961 (+)
Gene ID: B65_contig_71_1804
Type: pfam
Location: 1949046 - 1950383 (+)
Type: pfam
Location: 1949046 - 1950383 (+)
Gene ID: B65_contig_71_1805
Type: TC
Location: 1950469 - 1951851 (+)
Type: TC
Location: 1950469 - 1951851 (+)
Gene ID: B65_contig_71_1806
Type: TC
Location: 1951851 - 1952762 (+)
Type: TC
Location: 1951851 - 1952762 (+)
Gene ID: B65_contig_71_1807
Type:
Location: 1952777 - 1952875 (+)
Type:
Location: 1952777 - 1952875 (+)
Gene ID: B65_contig_71_1808
Type: CAZyme
Location: 1953085 - 1954848 (+)
Type: CAZyme
Location: 1953085 - 1954848 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.