Cluster: B65.bin_10_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: B65.bin_10
- CGC Family ID: CGCFAM_04596
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B65_contig_71 | B65_contig_71_335 | 374708 | 375436 | - | GT26 |
| CAZyme | B65_contig_71 | B65_contig_71_336 | 375497 | 376336 | - | GT23 |
| TC | B65_contig_71 | B65_contig_71_337 | 376333 | 378078 | - | 3.A.1.106.15 |
| CAZyme | B65_contig_71 | B65_contig_71_338 | 378092 | 378970 | - | GT11 |
| TC | B65_contig_71 | B65_contig_71_339 | 378985 | 380523 | - | 9.B.142.3.8 |
Gene ID: B65_contig_71_335
Type: CAZyme
Location: 374708 - 375436 (-)
Type: CAZyme
Location: 374708 - 375436 (-)
Gene ID: B65_contig_71_336
Type: CAZyme
Location: 375497 - 376336 (-)
Type: CAZyme
Location: 375497 - 376336 (-)
Gene ID: B65_contig_71_337
Type: TC
Location: 376333 - 378078 (-)
Type: TC
Location: 376333 - 378078 (-)
Gene ID: B65_contig_71_338
Type: CAZyme
Location: 378092 - 378970 (-)
Type: CAZyme
Location: 378092 - 378970 (-)
Gene ID: B65_contig_71_339
Type: TC
Location: 378985 - 380523 (-)
Type: TC
Location: 378985 - 380523 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_71_335 | vegetarian > omnivore | 1.20451 | 0.00102 |
| B65_contig_71_336 | vegan > omnivore | 1.24265 | 0.00484 |
| B65_contig_71_336 | vegetarian > omnivore | 1.64810 | 0.00102 |
| B65_contig_71_339 | vegan > omnivore | 1.71426 | 0.00484 |
| B65_contig_71_339 | vegetarian > omnivore | 1.82796 | 0.00102 |