Cluster: B65.bin_10_CGC44
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate:
- Genome ID: B65.bin_10
- CGC Family ID: CGCFAM_00458
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B65_contig_437 | B65_contig_437_955 | 1089420 | 1090445 | - | GH16_3 |
| NULL(UNKNOWN) | B65_contig_437 | B65_contig_437_956 | 1090633 | 1091895 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | B65_contig_437 | B65_contig_437_957 | 1092014 | 1092856 | - | AP_endonuc_2 |
| CAZyme | B65_contig_437 | B65_contig_437_958 | 1092936 | 1094492 | - | GH28 |
| NULL(UNKNOWN) | B65_contig_437 | B65_contig_437_959 | 1094483 | 1095145 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B65_contig_437 | B65_contig_437_960 | 1095155 | 1097104 | - | CBM91 | GH43_12 |
| CAZyme | B65_contig_437 | B65_contig_437_961 | 1097106 | 1098686 | - | CBM91 | GH43_10 |
| CAZyme | B65_contig_437 | B65_contig_437_962 | 1098744 | 1099430 | - | CE12 |
| TC | B65_contig_437 | B65_contig_437_963 | 1099446 | 1100288 | - | 3.A.1.1.29 |
| TC | B65_contig_437 | B65_contig_437_964 | 1100304 | 1101269 | - | 3.A.1.1.10 |
Gene ID: B65_contig_437_955
Type: CAZyme
Location: 1089420 - 1090445 (-)
Type: CAZyme
Location: 1089420 - 1090445 (-)
Gene ID: B65_contig_437_956
Type:
Location: 1090633 - 1091895 (-)
Type:
Location: 1090633 - 1091895 (-)
Gene ID: B65_contig_437_957
Type: pfam
Location: 1092014 - 1092856 (-)
Type: pfam
Location: 1092014 - 1092856 (-)
Gene ID: B65_contig_437_958
Type: CAZyme
Location: 1092936 - 1094492 (-)
Type: CAZyme
Location: 1092936 - 1094492 (-)
Gene ID: B65_contig_437_959
Type:
Location: 1094483 - 1095145 (-)
Type:
Location: 1094483 - 1095145 (-)
Gene ID: B65_contig_437_960
Type: CAZyme
Location: 1095155 - 1097104 (-)
Type: CAZyme
Location: 1095155 - 1097104 (-)
Gene ID: B65_contig_437_961
Type: CAZyme
Location: 1097106 - 1098686 (-)
Type: CAZyme
Location: 1097106 - 1098686 (-)
Gene ID: B65_contig_437_962
Type: CAZyme
Location: 1098744 - 1099430 (-)
Type: CAZyme
Location: 1098744 - 1099430 (-)
Gene ID: B65_contig_437_963
Type: TC
Location: 1099446 - 1100288 (-)
Type: TC
Location: 1099446 - 1100288 (-)
Gene ID: B65_contig_437_964
Type: TC
Location: 1100304 - 1101269 (-)
Type: TC
Location: 1100304 - 1101269 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_437_957 | vegetarian > omnivore | 1.45865 | 0.00102 |
| B65_contig_437_958 | vegan > omnivore | 2.09997 | 0.00484 |
| B65_contig_437_958 | vegetarian > omnivore | 1.94809 | 0.00102 |
| B65_contig_437_961 | vegan > omnivore | 1.30227 | 0.00484 |
| B65_contig_437_961 | vegetarian > omnivore | 1.38448 | 0.00102 |
| B65_contig_437_962 | vegetarian > omnivore | 1.03036 | 0.00102 |
| B65_contig_437_964 | vegan > omnivore | 1.42889 | 0.00484 |