Cluster: B65.bin_10_CGC43
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: B65.bin_10
- CGC Family ID: CGCFAM_04594
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B65_contig_437 | B65_contig_437_844 | 979046 | 980572 | + | CBM91 | GH43_12 |
| TC | B65_contig_437 | B65_contig_437_845 | 980690 | 982216 | - | 2.A.21.2.3 |
| TC | B65_contig_437 | B65_contig_437_846 | 982533 | 983036 | + | 2.A.49.9.4 |
| TC | B65_contig_437 | B65_contig_437_847 | 983033 | 983737 | + | 2.A.49.9.3 |
Gene ID: B65_contig_437_844
Type: CAZyme
Location: 979046 - 980572 (+)
Type: CAZyme
Location: 979046 - 980572 (+)
Gene ID: B65_contig_437_845
Type: TC
Location: 980690 - 982216 (-)
Type: TC
Location: 980690 - 982216 (-)
Gene ID: B65_contig_437_846
Type: TC
Location: 982533 - 983036 (+)
Type: TC
Location: 982533 - 983036 (+)
Gene ID: B65_contig_437_847
Type: TC
Location: 983033 - 983737 (+)
Type: TC
Location: 983033 - 983737 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_437_844 | vegetarian > omnivore | 1.74402 | 0.00102 |
| B65_contig_437_847 | vegan > omnivore | 1.10589 | 0.00484 |
| B65_contig_437_847 | vegetarian > omnivore | 1.06279 | 0.00102 |