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Cluster: B65.bin_10_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B65_contig_437 B65_contig_437_95 94662 95597 + GH113
pfam B65_contig_437 B65_contig_437_96 95729 97447 + PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
CAZyme B65_contig_437 B65_contig_437_97 97464 99653 + GH36
TF B65_contig_437 B65_contig_437_98 99696 100721 + LacI
STP B65_contig_437 B65_contig_437_99 102138 103607 + SBP_bac_1
TC B65_contig_437 B65_contig_437_100 103679 104683 + 3.A.1.1.23
TC B65_contig_437 B65_contig_437_101 104688 105563 + 3.A.1.1.27
pfam B65_contig_437 B65_contig_437_102 105585 106814 + GlcNAc_2-epim
CAZyme B65_contig_437 B65_contig_437_103 106858 108036 + GH130_1
CAZyme B65_contig_437 B65_contig_437_104 108160 109182 + GH130_2
CAZyme B65_contig_437 B65_contig_437_105 109384 110430 + CE2
CAZyme B65_contig_437 B65_contig_437_106 110447 111565 + CBM35inCE17 | CE17
CAZyme B65_contig_437 B65_contig_437_107 111590 113896 + GH1
Gene ID: B65_contig_437_95
Type: CAZyme
Location: 94662 - 95597 (+)
Gene ID: B65_contig_437_96
Type: pfam
Location: 95729 - 97447 (+)
Gene ID: B65_contig_437_97
Type: CAZyme
Location: 97464 - 99653 (+)
Gene ID: B65_contig_437_98
Type: TF
Location: 99696 - 100721 (+)
Gene ID: B65_contig_437_99
Type: STP
Location: 102138 - 103607 (+)
Gene ID: B65_contig_437_100
Type: TC
Location: 103679 - 104683 (+)
Gene ID: B65_contig_437_101
Type: TC
Location: 104688 - 105563 (+)
Gene ID: B65_contig_437_102
Type: pfam
Location: 105585 - 106814 (+)
Gene ID: B65_contig_437_103
Type: CAZyme
Location: 106858 - 108036 (+)
Gene ID: B65_contig_437_104
Type: CAZyme
Location: 108160 - 109182 (+)
Gene ID: B65_contig_437_105
Type: CAZyme
Location: 109384 - 110430 (+)
Gene ID: B65_contig_437_106
Type: CAZyme
Location: 110447 - 111565 (+)
Gene ID: B65_contig_437_107
Type: CAZyme
Location: 111590 - 113896 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B65_contig_437_102 vegetarian > vegan 1.02907 0.00455
B65_contig_437_106 vegetarian > omnivore 1.45665 0.00102

🧭 Explore Read Mapping of CGC

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