Cluster: B65.bin_10_CGC30
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: B65.bin_10
- CGC Family ID: CGCFAM_00032
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B65_contig_71 | B65_contig_71_2065 | 2234340 | 2235701 | + | 9.B.18.1.3 |
| CAZyme | B65_contig_71 | B65_contig_71_2066 | 2235923 | 2240296 | + | GH73 |
| CAZyme | B65_contig_71 | B65_contig_71_2067 | 2240319 | 2241140 | + | GT2 |
Gene ID: B65_contig_71_2065
Type: TC
Location: 2234340 - 2235701 (+)
Type: TC
Location: 2234340 - 2235701 (+)
Gene ID: B65_contig_71_2066
Type: CAZyme
Location: 2235923 - 2240296 (+)
Type: CAZyme
Location: 2235923 - 2240296 (+)
Gene ID: B65_contig_71_2067
Type: CAZyme
Location: 2240319 - 2241140 (+)
Type: CAZyme
Location: 2240319 - 2241140 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_71_2066 | vegetarian > omnivore | 1.14141 | 0.00102 |
| B65_contig_71_2067 | vegetarian > omnivore | 1.50949 | 0.00102 |