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Cluster: B65.bin_10_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B65_contig_71 B65_contig_71_1642 1778772 1780061 + GH125
CAZyme B65_contig_71 B65_contig_71_1643 1780166 1782874 + GH38
CAZyme B65_contig_71 B65_contig_71_1644 1782959 1785793 - CBM32 | GH85
TF B65_contig_71 B65_contig_71_1645 1786077 1787105 - LacI
TC B65_contig_71 B65_contig_71_1646 1787445 1788398 + 3.A.1.1.29
TC B65_contig_71 B65_contig_71_1647 1788411 1789331 + 3.A.1.1.29
pfam B65_contig_71 B65_contig_71_1648 1789379 1790842 + DUF3502
CAZyme B65_contig_71 B65_contig_71_1649 1790857 1791843 + GH130_2
NULL(UNKNOWN) B65_contig_71 B65_contig_71_1650 1791936 1794047 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) B65_contig_71 B65_contig_71_1651 1794063 1796318 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme B65_contig_71 B65_contig_71_1652 1796422 1799511 + GH38
pfam B65_contig_71 B65_contig_71_1653 1799585 1800877 + MFS_1
CAZyme B65_contig_71 B65_contig_71_1654 1800888 1803083 + GH3
CAZyme B65_contig_71 B65_contig_71_1655 1803115 1804956 + GH20
TF B65_contig_71 B65_contig_71_1656 1805166 1805714 + SpoVT_AbrB
pfam B65_contig_71 B65_contig_71_1657 1805848 1806834 + Metallophos
TC B65_contig_71 B65_contig_71_1658 1806825 1808510 + 1.C.105.2.8
CAZyme B65_contig_71 B65_contig_71_1659 1808524 1810872 + GT51
pfam B65_contig_71 B65_contig_71_1660 1811068 1812006 + ROK
TC B65_contig_71 B65_contig_71_1661 1812074 1812757 - 2.A.88.3.1
Gene ID: B65_contig_71_1642
Type: CAZyme
Location: 1778772 - 1780061 (+)
Gene ID: B65_contig_71_1643
Type: CAZyme
Location: 1780166 - 1782874 (+)
Gene ID: B65_contig_71_1644
Type: CAZyme
Location: 1782959 - 1785793 (-)
Gene ID: B65_contig_71_1645
Type: TF
Location: 1786077 - 1787105 (-)
Gene ID: B65_contig_71_1646
Type: TC
Location: 1787445 - 1788398 (+)
Gene ID: B65_contig_71_1647
Type: TC
Location: 1788411 - 1789331 (+)
Gene ID: B65_contig_71_1648
Type: pfam
Location: 1789379 - 1790842 (+)
Gene ID: B65_contig_71_1649
Type: CAZyme
Location: 1790857 - 1791843 (+)
Gene ID: B65_contig_71_1650
Type:
Location: 1791936 - 1794047 (+)
Gene ID: B65_contig_71_1651
Type:
Location: 1794063 - 1796318 (+)
Gene ID: B65_contig_71_1652
Type: CAZyme
Location: 1796422 - 1799511 (+)
Gene ID: B65_contig_71_1653
Type: pfam
Location: 1799585 - 1800877 (+)
Gene ID: B65_contig_71_1654
Type: CAZyme
Location: 1800888 - 1803083 (+)
Gene ID: B65_contig_71_1655
Type: CAZyme
Location: 1803115 - 1804956 (+)
Gene ID: B65_contig_71_1656
Type: TF
Location: 1805166 - 1805714 (+)
Gene ID: B65_contig_71_1657
Type: pfam
Location: 1805848 - 1806834 (+)
Gene ID: B65_contig_71_1658
Type: TC
Location: 1806825 - 1808510 (+)
Gene ID: B65_contig_71_1659
Type: CAZyme
Location: 1808524 - 1810872 (+)
Gene ID: B65_contig_71_1660
Type: pfam
Location: 1811068 - 1812006 (+)
Gene ID: B65_contig_71_1661
Type: TC
Location: 1812074 - 1812757 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B65_contig_71_1642 vegetarian > omnivore 1.09817 0.00102
B65_contig_71_1643 vegetarian > omnivore 1.27988 0.00102
B65_contig_71_1645 vegetarian > vegan 1.23737 0.00455
B65_contig_71_1645 vegetarian > omnivore 1.12615 0.00102
B65_contig_71_1646 vegetarian > vegan 1.85803 0.00455
B65_contig_71_1646 vegetarian > omnivore 1.30625 0.00102
B65_contig_71_1649 vegetarian > vegan 1.22808 0.00455
B65_contig_71_1653 vegetarian > vegan 1.11534 0.00455
B65_contig_71_1654 vegetarian > omnivore 1.36864 0.00102
B65_contig_71_1657 vegetarian > omnivore 1.09640 0.00102

🧭 Explore Read Mapping of CGC

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