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Cluster: B65.bin_10_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B65_contig_71 B65_contig_71_2005 2161253 2161618 + 1.E.14.1.1
TC B65_contig_71 B65_contig_71_2006 2161615 2162307 + 2.A.122.1.4
CAZyme B65_contig_71 B65_contig_71_2007 2162484 2163350 + CBM50
pfam B65_contig_71 B65_contig_71_2008 2163628 2164713 + UxuA
TF B65_contig_71 B65_contig_71_2009 2164878 2165849 - HTH_AraC
TC B65_contig_71 B65_contig_71_2010 2166050 2167423 + 2.A.2.3.9
Gene ID: B65_contig_71_2005
Type: TC
Location: 2161253 - 2161618 (+)
Gene ID: B65_contig_71_2006
Type: TC
Location: 2161615 - 2162307 (+)
Gene ID: B65_contig_71_2007
Type: CAZyme
Location: 2162484 - 2163350 (+)
Gene ID: B65_contig_71_2008
Type: pfam
Location: 2163628 - 2164713 (+)
Gene ID: B65_contig_71_2009
Type: TF
Location: 2164878 - 2165849 (-)
Gene ID: B65_contig_71_2010
Type: TC
Location: 2166050 - 2167423 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B65_contig_71_2006 vegetarian > omnivore 1.63980 0.00102
B65_contig_71_2007 vegetarian > omnivore 1.10848 0.00102
B65_contig_71_2008 vegetarian > omnivore 1.67716 0.00102
B65_contig_71_2010 vegetarian > omnivore 1.06160 0.00102

🧭 Explore Read Mapping of CGC

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