Cluster: B65.bin_10_CGC40
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: B65.bin_10
- CGC Family ID: CGCFAM_00419
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B65_contig_437 | B65_contig_437_642 | 747823 | 750237 | + | GH94 |
| CAZyme | B65_contig_437 | B65_contig_437_643 | 750269 | 752977 | + | GH94 |
| TF | B65_contig_437 | B65_contig_437_644 | 753052 | 753792 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | B65_contig_437 | B65_contig_437_645 | 753964 | 755376 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B65_contig_437 | B65_contig_437_646 | 755606 | 756520 | + | 3.A.1.1.4 |
| TC | B65_contig_437 | B65_contig_437_647 | 756526 | 757386 | + | 3.A.1.1.13 |
Gene ID: B65_contig_437_642
Type: CAZyme
Location: 747823 - 750237 (+)
Type: CAZyme
Location: 747823 - 750237 (+)
Gene ID: B65_contig_437_643
Type: CAZyme
Location: 750269 - 752977 (+)
Type: CAZyme
Location: 750269 - 752977 (+)
Gene ID: B65_contig_437_644
Type: TF
Location: 753052 - 753792 (-)
Type: TF
Location: 753052 - 753792 (-)
Gene ID: B65_contig_437_645
Type:
Location: 753964 - 755376 (+)
Type:
Location: 753964 - 755376 (+)
Gene ID: B65_contig_437_646
Type: TC
Location: 755606 - 756520 (+)
Type: TC
Location: 755606 - 756520 (+)
Gene ID: B65_contig_437_647
Type: TC
Location: 756526 - 757386 (+)
Type: TC
Location: 756526 - 757386 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_437_647 | vegetarian > vegan | 1.35178 | 0.00455 |