Cluster: B65.bin_10_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: B65.bin_10
- CGC Family ID: CGCFAM_03049
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B65_contig_71 | B65_contig_71_25 | 19987 | 20811 | - | CE4 |
| TC | B65_contig_71 | B65_contig_71_26 | 21079 | 22407 | - | 3.A.1.122.2 |
| TC | B65_contig_71 | B65_contig_71_27 | 22407 | 23105 | - | 3.A.1.122.2 |
Gene ID: B65_contig_71_25
Type: CAZyme
Location: 19987 - 20811 (-)
Type: CAZyme
Location: 19987 - 20811 (-)
Gene ID: B65_contig_71_26
Type: TC
Location: 21079 - 22407 (-)
Type: TC
Location: 21079 - 22407 (-)
Gene ID: B65_contig_71_27
Type: TC
Location: 22407 - 23105 (-)
Type: TC
Location: 22407 - 23105 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B65_contig_71_25 | vegetarian > omnivore | 1.13402 | 0.00102 |
| B65_contig_71_25 | vegetarian > vegan | 1.25869 | 0.00455 |
| B65_contig_71_26 | vegan > omnivore | 1.32017 | 0.00484 |
| B65_contig_71_26 | vegetarian > omnivore | 1.59701 | 0.00102 |
| B65_contig_71_27 | vegetarian > omnivore | 1.07942 | 0.00102 |
| B65_contig_71_27 | vegetarian > vegan | 1.38419 | 0.00455 |