Cluster: B65.bin_10_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: B65.bin_10
- CGC Family ID: CGCFAM_07363
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B65_contig_71 | B65_contig_71_1285 | 1373871 | 1375142 | - | 2.A.47.5.2 |
| TF | B65_contig_71 | B65_contig_71_1286 | 1375327 | 1376217 | + | HTH_1 |
| pfam | B65_contig_71 | B65_contig_71_1287 | 1376272 | 1377627 | - | MatE | MatE |
| CAZyme | B65_contig_71 | B65_contig_71_1288 | 1377736 | 1379454 | - | CBM34 | GH13_20 |
| pfam | B65_contig_71 | B65_contig_71_1289 | 1379752 | 1380264 | + | Flavodoxin_3 |
| STP | B65_contig_71 | B65_contig_71_1290 | 1380316 | 1382007 | - | EAL | GGDEF |
| TC | B65_contig_71 | B65_contig_71_1291 | 1382054 | 1383772 | - | 1.B.52.2.1 |
Gene ID: B65_contig_71_1285
Type: TC
Location: 1373871 - 1375142 (-)
Type: TC
Location: 1373871 - 1375142 (-)
Gene ID: B65_contig_71_1286
Type: TF
Location: 1375327 - 1376217 (+)
Type: TF
Location: 1375327 - 1376217 (+)
Gene ID: B65_contig_71_1287
Type: pfam
Location: 1376272 - 1377627 (-)
Type: pfam
Location: 1376272 - 1377627 (-)
Gene ID: B65_contig_71_1288
Type: CAZyme
Location: 1377736 - 1379454 (-)
Type: CAZyme
Location: 1377736 - 1379454 (-)
Gene ID: B65_contig_71_1289
Type: pfam
Location: 1379752 - 1380264 (+)
Type: pfam
Location: 1379752 - 1380264 (+)
Gene ID: B65_contig_71_1290
Type: STP
Location: 1380316 - 1382007 (-)
Type: STP
Location: 1380316 - 1382007 (-)
Gene ID: B65_contig_71_1291
Type: TC
Location: 1382054 - 1383772 (-)
Type: TC
Location: 1382054 - 1383772 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia
Species
Roseburia intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.