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Genome Details

Selected Rep_genome_ID: A49.CMAG_4
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Ruminococcus_C
→
Species
Ruminococcus_C callidus
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A49.CMAG_4 3,269,797 97.99% 0% China(Inner Mongolia) Asia IMGG
CGMR006899 2,335,253 96.64% 0% China Asia CGMR
GH182_11 3,083,717 97.99% 0% NA Africa H3AfricaPhase2
HRGMv2_2731 3,173,105 97.98% 0% NA NA HRGM
Rep_3343 2,896,564 96.5324% 0.671141% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
A49.CMAG_4_CGC22 CGCFAM_00011 Yes 10 3
A49.CMAG_4_CGC12 CGCFAM_00067 Yes 4 1 galactan
A49.CMAG_4_CGC14 CGCFAM_00089 Yes 4 2
A49.CMAG_4_CGC28 CGCFAM_00204 Yes 3 1
A49.CMAG_4_CGC27 CGCFAM_00317 Yes 10 2
A49.CMAG_4_CGC23 CGCFAM_00370 Yes 3 1
A49.CMAG_4_CGC15 CGCFAM_00952 Yes 4 1
A49.CMAG_4_CGC34 CGCFAM_01080 Yes 7 2 fructan
A49.CMAG_4_CGC18 CGCFAM_01574 Yes 9 1
A49.CMAG_4_CGC26 CGCFAM_03009 Yes 13 3
A49.CMAG_4_CGC20 CGCFAM_03129 Yes 4 1
A49.CMAG_4_CGC36 CGCFAM_03130 Yes 6 3
A49.CMAG_4_CGC6 CGCFAM_04264 Yes 7 2
A49.CMAG_4_CGC16 CGCFAM_04442 Yes 4 1
A49.CMAG_4_CGC31 CGCFAM_04444 Yes 6 1
A49.CMAG_4_CGC7 CGCFAM_04445 Yes 10 1
A49.CMAG_4_CGC25 CGCFAM_06571 Yes 4 1
A49.CMAG_4_CGC2 CGCFAM_06779 Yes 7 1
A49.CMAG_4_CGC21 CGCFAM_06780 Yes 3 1
A49.CMAG_4_CGC3 CGCFAM_06783 Yes 6 2
A49.CMAG_4_CGC30 CGCFAM_06784 Yes 7 1
A49.CMAG_4_CGC5 CGCFAM_06785 Yes 3 1
Top CAZyme Families