Cluster: A49.CMAG_4_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: A49.CMAG_4
- CGC Family ID: CGCFAM_00067
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A49_contig_1089 | A49_contig_1089_790 | 904625 | 906811 | - | GH36 |
| TC | A49_contig_1089 | A49_contig_1089_791 | 906936 | 907784 | - | 3.A.1.1.28 |
| TC | A49_contig_1089 | A49_contig_1089_792 | 907781 | 908662 | - | 3.A.1.1.45 |
| TC | A49_contig_1089 | A49_contig_1089_793 | 908659 | 909954 | - | 3.A.1.1.28 |
Gene ID: A49_contig_1089_790
Type: CAZyme
Location: 904625 - 906811 (-)
Type: CAZyme
Location: 904625 - 906811 (-)
Gene ID: A49_contig_1089_791
Type: TC
Location: 906936 - 907784 (-)
Type: TC
Location: 906936 - 907784 (-)
Gene ID: A49_contig_1089_792
Type: TC
Location: 907781 - 908662 (-)
Type: TC
Location: 907781 - 908662 (-)
Gene ID: A49_contig_1089_793
Type: TC
Location: 908659 - 909954 (-)
Type: TC
Location: 908659 - 909954 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C callidus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A49_contig_1089_793 | vegan > omnivore | 1.16114 | 0.00068 |