Cluster: A49.CMAG_4_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.CMAG_4
- CGC Family ID: CGCFAM_00370
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A49_contig_1089 | A49_contig_1089_1471 | 1685230 | 1685976 | - | CE4 |
| pfam | A49_contig_1089 | A49_contig_1089_1472 | 1686153 | 1687121 | - | cobW | DUF1980_C |
| TC | A49_contig_1089 | A49_contig_1089_1473 | 1687137 | 1688276 | - | 9.B.10.1.1 |
Gene ID: A49_contig_1089_1471
Type: CAZyme
Location: 1685230 - 1685976 (-)
Type: CAZyme
Location: 1685230 - 1685976 (-)
Gene ID: A49_contig_1089_1472
Type: pfam
Location: 1686153 - 1687121 (-)
Type: pfam
Location: 1686153 - 1687121 (-)
Gene ID: A49_contig_1089_1473
Type: TC
Location: 1687137 - 1688276 (-)
Type: TC
Location: 1687137 - 1688276 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C callidus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A49_contig_1089_1471 | vegan > omnivore | 1.44617 | 0.00068 |
| A49_contig_1089_1471 | vegetarian > omnivore | 1.71256 | 0.00341 |