Cluster: A49.CMAG_4_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A49.CMAG_4
- CGC Family ID: CGCFAM_06785
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A49_contig_1089 | A49_contig_1089_486 | 535702 | 537336 | + | 4.C.1.1.6 |
| STP | A49_contig_1089 | A49_contig_1089_487 | 537339 | 537755 | + | NUDIX |
| CAZyme | A49_contig_1089 | A49_contig_1089_488 | 538010 | 539791 | + | GH5_4 |
Gene ID: A49_contig_1089_486
Type: TC
Location: 535702 - 537336 (+)
Type: TC
Location: 535702 - 537336 (+)
Gene ID: A49_contig_1089_487
Type: STP
Location: 537339 - 537755 (+)
Type: STP
Location: 537339 - 537755 (+)
Gene ID: A49_contig_1089_488
Type: CAZyme
Location: 538010 - 539791 (+)
Type: CAZyme
Location: 538010 - 539791 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C callidus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| A49_contig_1089_488 | vegan > omnivore | 1.93900 | 0.00068 |
| A49_contig_1089_488 | vegetarian > omnivore | 1.50964 | 0.00341 |