CGCs
Total: 123241 Gene Clusters| Cluster ID ↑ | CGC Family | Total Gene Count | CAZyme Gene Count | Substrate | CAZymes | Continent |
|---|---|---|---|---|---|---|
| Rep_534_CGC1 | — | 3 | 1 | — |
GH179
Chitin or peptidoglycan
|
NA |
| Rep_534_CGC10 | — | 3 | 1 | — |
GH28
Xylogalacturonan (pectin), Galacturonan (pectin), Rhamnogalacturonan (pectin), Pectin (rhamnogalacturonan i)
|
NA |
| Rep_534_CGC11 | — | 6 | 1 | — |
GT2
|
NA |
| Rep_534_CGC12 | — | 6 | 2 | — |
GH43
Arabinan, arabinoxylan, Beta-1, 3-galactan, arabinogalactan, Beta-galactofuranoside, 3-xylan (algae), Xylan, Arabinoxylan
PL1
Pectin, Homogalacturonan(de-esterified pectin)
|
NA |
| Rep_534_CGC13 | CGCFAM_04850 | 4 | 2 | — |
GT35
GT3
|
NA |
| Rep_534_CGC14 | CGCFAM_01174 | 4 | 1 | — |
GH28
Xylogalacturonan (pectin), Galacturonan (pectin), Rhamnogalacturonan (pectin), Pectin (rhamnogalacturonan i)
|
NA |
| Rep_534_CGC15 | — | 9 | 2 | — |
GT2
GT4
|
NA |
| Rep_534_CGC16 | CGCFAM_03702 | 4 | 1 | — |
GT2
|
NA |
| Rep_534_CGC17 | — | 9 | 1 | — |
CBM50
Chitin or peptidoglycan
|
NA |
| Rep_534_CGC18 | CGCFAM_06562 | 8 | 4 | — |
GT2
GT4
|
NA |
| Rep_534_CGC19 | — | 16 | 2 | — |
GH109
Mucin-type o-glycans
CE4
Chitooligosaccharides, Chitin, Peptidoglycan, Acetylxylan
|
NA |
| Rep_534_CGC2 | CGCFAM_03276 | 3 | 1 | — |
PL11
Rhamnogalacturonan i(pectin from the plant cell wall)
|
NA |
| Rep_534_CGC20 | — | 8 | 1 | — |
GT30
|
NA |
| Rep_534_CGC21 | — | 21 | 9 | — |
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
CE12
Pectin, Acetyl xylan
GH51
Arabinan, arabinoxylan, Cellulose, beta-glucan, Xylan
GH16
Agarose, Arabinogalactan proteins, Beta-1, 3-glucan, 3-glucan (fungi, algae, plant), 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Carrageenan, Chitin, Exopolysaccharides (bacteria), Mucin-type o-glycans, Keratan sulfate (host glycan), Hyaluronate (glycosaminoglycan of host glycan), Porphyran (red algal beta-galactose-sulfate), Xyloglucan (plant), Xyloglucan
GH97
Alpha-glucose residue, Alpha-galactoside, alpha-fucoside, Starch
GH35
Beta-galactoside, Chitosan, chitin, Galactan and arabinogalactan
GH43
Arabinan, arabinoxylan, Beta-1, 3-galactan, arabinogalactan, Beta-galactofuranoside, 3-xylan (algae), Xylan, Arabinoxylan
|
NA |
| Rep_534_CGC22 | — | 5 | 1 | — |
GT1
|
NA |
| Rep_534_CGC23 | CGCFAM_00640 | 3 | 1 | — |
CBM50
Chitin or peptidoglycan
|
NA |
| Rep_534_CGC24 | — | 6 | 1 | — |
PL1
Pectin, Homogalacturonan(de-esterified pectin)
|
NA |
| Rep_534_CGC25 | CGCFAM_04939 | 4 | 1 | — |
GH25
Peptidoglycan
|
NA |
| Rep_534_CGC26 | — | 13 | 4 | — |
GH141
Pectin (rhamnogalacturonan ii), Xylan
GH31
Alpha-galactoside, Alpha-mannoside, Sulfoquinovoside (plant sulfolipid), Human blood group a, mucin, host glycan, Mannosyl-oligosaccharide, Glycogen and starch, Starch, Sucrose, Xyloglucan (plant)
PL42
Arabinogalactan
GH23
Chitin, Peptidoglycan
|
NA |
| Rep_534_CGC28 | — | 8 | 2 | — |
GH28
Xylogalacturonan (pectin), Galacturonan (pectin), Rhamnogalacturonan (pectin), Pectin (rhamnogalacturonan i)
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
NA |