Cluster: Rep_534_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_534
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_534_c_14 | Rep_534_c_14_57 | 66153 | 67958 | - | 4.C.1.1.14 |
| peptidase | Rep_534_c_14 | Rep_534_c_14_58 | 68045 | 69106 | + | M20.016 |
| CAZyme | Rep_534_c_14 | Rep_534_c_14_59 | 69214 | 71715 | - | PL1_2 |
| pfam | Rep_534_c_14 | Rep_534_c_14_60 | 72342 | 73523 | + | Lnb_N |
| pfam | Rep_534_c_14 | Rep_534_c_14_61 | 73520 | 75094 | + | Phosphodiest |
| TC | Rep_534_c_14 | Rep_534_c_14_62 | 75222 | 78524 | + | 3.A.5.1.1 |
Gene ID: Rep_534_c_14_57
Type: TC
Location: 66153 - 67958 (-)
Type: TC
Location: 66153 - 67958 (-)
Gene ID: Rep_534_c_14_58
Type: peptidase
Location: 68045 - 69106 (+)
Type: peptidase
Location: 68045 - 69106 (+)
Gene ID: Rep_534_c_14_59
Type: CAZyme
Location: 69214 - 71715 (-)
Type: CAZyme
Location: 69214 - 71715 (-)
Gene ID: Rep_534_c_14_60
Type: pfam
Location: 72342 - 73523 (+)
Type: pfam
Location: 72342 - 73523 (+)
Gene ID: Rep_534_c_14_61
Type: pfam
Location: 73520 - 75094 (+)
Type: pfam
Location: 73520 - 75094 (+)
Gene ID: Rep_534_c_14_62
Type: TC
Location: 75222 - 78524 (+)
Type: TC
Location: 75222 - 78524 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp003489705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.