Cluster: Rep_534_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_534
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_534_c_14 | Rep_534_c_14_5 | 5161 | 6282 | - | GT1 |
| pfam | Rep_534_c_14 | Rep_534_c_14_6 | 6279 | 7088 | - | Metallophos |
| TC | Rep_534_c_14 | Rep_534_c_14_7 | 7176 | 8540 | - | 2.A.6.2.44 |
| TC | Rep_534_c_14 | Rep_534_c_14_8 | 8549 | 11671 | - | 2.A.6.2.22 |
| TC | Rep_534_c_14 | Rep_534_c_14_9 | 11687 | 12871 | - | 2.A.6.2.29 |
Gene ID: Rep_534_c_14_5
Type: CAZyme
Location: 5161 - 6282 (-)
Type: CAZyme
Location: 5161 - 6282 (-)
Gene ID: Rep_534_c_14_6
Type: pfam
Location: 6279 - 7088 (-)
Type: pfam
Location: 6279 - 7088 (-)
Gene ID: Rep_534_c_14_7
Type: TC
Location: 7176 - 8540 (-)
Type: TC
Location: 7176 - 8540 (-)
Gene ID: Rep_534_c_14_8
Type: TC
Location: 8549 - 11671 (-)
Type: TC
Location: 8549 - 11671 (-)
Gene ID: Rep_534_c_14_9
Type: TC
Location: 11687 - 12871 (-)
Type: TC
Location: 11687 - 12871 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp003489705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.