Cluster: Rep_534_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_534
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_534_c_4 | Rep_534_c_4_13 | 15875 | 17458 | - | GH28 |
| pfam | Rep_534_c_4 | Rep_534_c_4_14 | 17587 | 18510 | + | DHDPS |
| TC | Rep_534_c_4 | Rep_534_c_4_15 | 18525 | 19970 | + | 2.A.21.3.7 |
Gene ID: Rep_534_c_4_13
Type: CAZyme
Location: 15875 - 17458 (-)
Type: CAZyme
Location: 15875 - 17458 (-)
Gene ID: Rep_534_c_4_14
Type: pfam
Location: 17587 - 18510 (+)
Type: pfam
Location: 17587 - 18510 (+)
Gene ID: Rep_534_c_4_15
Type: TC
Location: 18525 - 19970 (+)
Type: TC
Location: 18525 - 19970 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp003489705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.