Cluster: Rep_534_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_534
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_534_c_0 | Rep_534_c_0_33 | 35278 | 36252 | - | GH179 |
| NULL(UNKNOWN) | Rep_534_c_0 | Rep_534_c_0_34 | 36377 | 37402 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_534_c_0 | Rep_534_c_0_35 | 37468 | 38802 | - | 2.A.66.1.33 |
Gene ID: Rep_534_c_0_33
Type: CAZyme
Location: 35278 - 36252 (-)
Type: CAZyme
Location: 35278 - 36252 (-)
Gene ID: Rep_534_c_0_34
Type:
Location: 36377 - 37402 (+)
Type:
Location: 36377 - 37402 (+)
Gene ID: Rep_534_c_0_35
Type: TC
Location: 37468 - 38802 (-)
Type: TC
Location: 37468 - 38802 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp003489705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.